EnhancerDB
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  3. rs550345938[chr17:77787652]
Enhancers that have rs550345938[chr17:77787652]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77780565 77806815 enh4626
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Stomach Muscle (A673) Placenta Blood (Karpas-422) Pancreas Pancreas (Panc1) Thymus Heart
Transcript factors that have rs550345938[chr17:77787652]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77786991 77787737 POLR2A UCSC Txn Factor no Conserved 108305409
chr17 77787187 77787737 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795966
chr17 77787187 77787737 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108305424
chr17 77787222 77787712 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108305425
chr17 77787228 77787672 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21795968
chr17 77787228 77787672 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108305427
chr17 77787230 77787686 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795969
chr17 77787230 77787686 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108305428
chr17 77787305 77787830 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795976
chr17 77787305 77787830 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108305438
chr17 77787306 77787779 ZNF274 GTRD no Blood (GM12878) 108305439
chr17 77787345 77787672 ZNF274 GTRD no Blood (GM12878) 108305443
Genes associated with rs550345938[chr17:77787652], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More