EnhancerDB
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  3. rs550348627[chr1:115972353]
Enhancers that have rs550348627[chr1:115972353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115966905 115976995 enh27090
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs550348627[chr1:115972353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115972343 115972355 TAL1 JASPAR yes 31735518
chr1 115972345 115972355 NEUROG2 JASPAR yes 31735519
chr1 115972346 115972366 ESR1 JASPAR yes 31735520
chr1 115972351 115972366 ESR2 JASPAR yes 31735521
Genes associated with rs550348627[chr1:115972353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More