EnhancerDB
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  3. rs550353528[chr17:49513444]
Enhancers that have rs550353528[chr17:49513444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49502285 49519023 enh48044
Skin (Keratinocyte) Blood (T-cell) Esophagus Colon (HCT116) Thyroid Pancreas Spleen Thymus Heart
Transcript factors that have rs550353528[chr17:49513444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49511579 49515001 ZNF143 GTRD no Epithelial (MCF-7) 108272221
chr17 49511582 49514925 ZNF143 GTRD no Epithelial (MCF-7) 108272222
chr17 49512302 49514927 ZNF143 GTRD no Epithelial (MCF-7) 108272223
chr17 49512391 49513454 ZNF274 GTRD no Bone Marrow (K562) 108272225
chr17 49512428 49514454 TCF7L2 GTRD no Colon (HCT116) 21772176
chr17 49512428 49514454 TCF7L2 GTRD no Colon (HCT116) 108272226
chr17 49512444 49514954 TCF7L2 GTRD no Colon (HCT116) 21772179
chr17 49512444 49514954 TCF7L2 GTRD no Colon (HCT116) 108272229
chr17 49512469 49513689 TCF7L2 GTRD no Colon (HCT116) 21772180
chr17 49512469 49513689 TCF7L2 GTRD no Colon (HCT116) 108272230
chr17 49512828 49513501 ZNF274 GTRD no Blood (GM12878) 108272234
chr17 49512981 49513550 ZNF274 GTRD no Blood (GM12878) 108272238
chr17 49512990 49513466 TCF7L2 GTRD no Colon (HCT116) 21772183
chr17 49512990 49513466 TCF7L2 GTRD no Colon (HCT116) 108272239
chr17 49513016 49513586 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108272241
chr17 49513181 49515070 TCF7L2 GTRD no Colon (HCT116) 21772185
chr17 49513181 49515070 TCF7L2 GTRD no Colon (HCT116) 108272268
chr17 49513213 49513625 ZNF274 GTRD no Blood (GM12878) 108272271
chr17 49513442 49513463 IRF1 JASPAR yes 54766726
chr17 49513444 49513459 FOXP1 JASPAR yes 54766727
Genes associated with rs550353528[chr17:49513444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More