EnhancerDB
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  3. rs550362098[chr6:45678610]
Enhancers that have rs550362098[chr6:45678610]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 45662280 45688915 enh39024
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs550362098[chr6:45678610]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 45678131 45678651 CEBPB UCSC Txn Factor no Conserved 108540524
chr6 45678305 45678634 TFAP2C UCSC Txn Factor no Conserved 108540533
chr6 45678333 45678613 TFAP2A UCSC Txn Factor no Conserved 108540534
chr6 45678350 45678657 POLR2A UCSC Txn Factor no Conserved 108540535
chr6 45678606 45678610 NFE TRANSFAC yes 101920842
chr6 45678607 45678617 SMAD3 JASPAR yes 101920843
Genes associated with rs550362098[chr6:45678610], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More