EnhancerDB
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  3. rs550400066[chr12:48291701]
Enhancers that have rs550400066[chr12:48291701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48274565 48298301 enh43733
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Liver Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs550400066[chr12:48291701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48291686 48291701 FOXA1 JASPAR yes 120726239
chr12 48291690 48291701 FOXA1 JASPAR yes 120726240
chr12 48291695 48291716 MAFG JASPAR yes 120726241
chr12 48291696 48291702 LEF1 TRANSFAC yes 120726242
chr12 48291696 48291702 TCF4 TRANSFAC yes 120726243
Genes associated with rs550400066[chr12:48291701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More