EnhancerDB
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  3. rs550464856[chr17:78709980]
Enhancers that have rs550464856[chr17:78709980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78688225 78715375 enh4635
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Thymus Stomach
Transcript factors that have rs550464856[chr17:78709980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78709969 78709984 FOXP1 JASPAR yes 56273202
chr17 78709970 78709985 FOXP1 JASPAR yes 56273203
chr17 78709970 78709991 IRF1 JASPAR yes 56273204
chr17 78709971 78709986 FOXP1 JASPAR yes 56273206
chr17 78709974 78709989 PRDM1 JASPAR yes 56273207
chr17 78709974 78709989 STAT2 JASPAR yes 56273208
chr17 78709974 78709992 NR3C1 JASPAR yes 56273209
Genes associated with rs550464856[chr17:78709980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More