EnhancerDB
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  3. rs550666171[chr2:205401373]
Enhancers that have rs550666171[chr2:205401373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 205392085 205405515 enh34170
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Stomach
Transcript factors that have rs550666171[chr2:205401373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 205401362 205401383 IRF1 JASPAR yes 80316416
chr2 205401363 205401383 RREB1 JASPAR yes 80316417
chr2 205401366 205401378 IRF1 JASPAR yes 80316418
chr2 205401366 205401380 IRF7 JASPAR yes 80316419
chr2 205401367 205401387 RREB1 JASPAR yes 80316420
chr2 205401368 205401374 TCF4 TRANSFAC yes 80316421
chr2 205401368 205401383 FOXP1 JASPAR yes 80316422
chr2 205401368 205401383 MEF2C JASPAR yes 80316423
chr2 205401369 205401384 RUNX2 JASPAR yes 80316424
chr2 205401371 205401391 RREB1 JASPAR yes 80316425
chr2 205401372 205401384 IRF1 JASPAR yes 80316426
chr2 205401372 205401392 RREB1 JASPAR yes 80316427
Genes associated with rs550666171[chr2:205401373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More