EnhancerDB
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  3. rs550787526[chr1:115975590]
Enhancers that have rs550787526[chr1:115975590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115966905 115976995 enh27090
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs550787526[chr1:115975590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115975325 115978487 ZNF274 GTRD no Cervix (HeLa-S3) 21331077
chr1 115975346 115977990 ZNF143 GTRD no Epithelial (MCF-7) 21331078
chr1 115975358 115978286 ZNF274 GTRD no Cervix (HeLa-S3) 21331079
chr1 115975367 115978667 ZNF143 GTRD no Epithelial (MCF-7) 21331080
chr1 115975374 115977658 ZNF143 GTRD no Epithelial (MCF-7) 21331081
chr1 115975445 115978027 ZNF143 GTRD no Epithelial (MCF-7) 21331082
chr1 115975459 115978113 ZNF274 GTRD no Cervix (HeLa-S3) 21331083
chr1 115975482 115976411 ZNF274 GTRD no Cervix (HeLa-S3) 21331084
chr1 115975491 115978055 ZNF143 GTRD no Epithelial (MCF-7) 21331085
chr1 115975494 115978099 ZNF274 GTRD no Cervix (HeLa-S3) 21331086
chr1 115975522 115978188 ZNF274 GTRD no Cervix (HeLa-S3) 21331087
chr1 115975548 115977225 ZNF143 GTRD no Epithelial (MCF-7) 21331088
chr1 115975553 115976472 ZNF143 GTRD no Epithelial (MCF-7) 21331089
chr1 115975553 115977928 ZNF143 GTRD no Epithelial (MCF-7) 21331090
chr1 115975559 115975958 ZNF143 GTRD no Epithelial (MCF-7) 21331091
chr1 115975578 115978094 ZNF274 GTRD no Cervix (HeLa-S3) 21331092
chr1 115975581 115975590 NKX3-2 JASPAR yes 31735987
chr1 115975582 115975590 ISL2 JASPAR yes 31735988
chr1 115975583 115976487 ZNF274 GTRD no Cervix (HeLa-S3) 21331093
Genes associated with rs550787526[chr1:115975590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More