EnhancerDB
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  3. rs550899198[chr1:200266677]
Enhancers that have rs550899198[chr1:200266677]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs550899198[chr1:200266677]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200266659 200266680 IRF1 JASPAR yes 34431120
chr1 200266660 200266681 IRF1 JASPAR yes 34431121
chr1 200266665 200266686 IRF1 JASPAR yes 34431122
chr1 200266666 200266681 FOXP1 JASPAR yes 34431124
chr1 200266666 200266687 IRF1 JASPAR yes 34431125
chr1 200266667 200266678 FOXP2 JASPAR yes 34431126
chr1 200266667 200266679 FOXC2 JASPAR yes 34431127
chr1 200266667 200266682 STAT2 JASPAR yes 34431128
chr1 200266667 200266687 RREB1 JASPAR yes 34431129
chr1 200266667 200266688 IRF1 JASPAR yes 34431130
chr1 200266668 200266683 FOXP1 JASPAR yes 34431131
chr1 200266670 200266685 FOXP1 JASPAR yes 34431132
chr1 200266671 200266686 FOXP1 JASPAR yes 34431133
chr1 200266672 200266687 FOXP1 JASPAR yes 34431134
chr1 200266672 200266692 RREB1 JASPAR yes 34431135
chr1 200266672 200266693 IRF1 JASPAR yes 34431136
chr1 200266673 200266694 IRF1 JASPAR yes 34431137
chr1 200266674 200266689 FOXP1 JASPAR yes 34431138
Genes associated with rs550899198[chr1:200266677], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More