Enhancers that have rs551134580[chr12:54145299]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54135485 54153565 enh2372
chr12 54145140 54145515 vista13541

Transcript factors that have rs551134580[chr12:54145299]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54144262 54146466 EZH2 UCSC Txn Factor no Conserved 108036534
chr12 54145128 54146257 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549573
chr12 54145128 54146257 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036537
chr12 54145144 54145414 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549575
chr12 54145144 54145414 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036539
chr12 54145144 54145464 PAX5 UCSC Txn Factor no Conserved 108036540
chr12 54145146 54145403 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549576
chr12 54145146 54145403 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036541
chr12 54145149 54145398 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549577
chr12 54145149 54145398 BCL11A UCSC Txn Factor no Conserved 108036542
chr12 54145149 54145398 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036543
chr12 54145153 54145449 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108036544
chr12 54145171 54145592 ZBTB33 GTRD no Lung (A549) 108036545
chr12 54145186 54145566 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549578
chr12 54145186 54145566 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036546
chr12 54145227 54145663 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549579
chr12 54145227 54145663 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036547
chr12 54145296 54145307 CDX2 JASPAR yes 82410487
chr12 54145296 54145307 CDX2 JASPAR yes 121004323
chr12 54145296 54145310 FOXF2 JASPAR yes 82410488
chr12 54145296 54145310 FOXF2 JASPAR yes 121004324
chr12 54145296 54145311 FOXP1 JASPAR yes 82410489
chr12 54145296 54145311 FOXP1 JASPAR yes 121004325
chr12 54145297 54145308 FOXH1 JASPAR yes 82410490
chr12 54145297 54145308 FOXH1 JASPAR yes 121004326
chr12 54145298 54145307 CDX1 JASPAR yes 82410491
chr12 54145298 54145307 CDX1 JASPAR yes 121004327
chr12 54145298 54145308 HOXA13 JASPAR yes 82410492
chr12 54145298 54145308 HOXA13 JASPAR yes 121004328
chr12 54145299 54145310 FOXP2 JASPAR yes 82410493
chr12 54145299 54145310 FOXP2 JASPAR yes 121004329
chr12 54145299 54145311 FOXI1 JASPAR yes 82410494
chr12 54145299 54145311 FOXI1 JASPAR yes 121004330

Genes associated with rs551134580[chr12:54145299], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More