EnhancerDB
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  3. rs551549193[chr12:52561475]
Enhancers that have rs551549193[chr12:52561475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs551549193[chr12:52561475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52561152 52562106 AR GTRD no Prostate (PC-3) 21546578
chr12 52561358 52562561 ZNF143 GTRD no Epithelial (MCF-7) 21546579
chr12 52561431 52562625 ZNF143 GTRD no Epithelial (MCF-7) 21546580
chr12 52561466 52561481 TFAP2C JASPAR yes 120924663
chr12 52561472 52561477 SP1 TRANSFAC yes 120924664
Genes associated with rs551549193[chr12:52561475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More