EnhancerDB
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Enhancers that have rs551980554[chr1:182999051]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182994265 183004736 enh27301
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Muscle (A673) Colon (HCT116) Adrenal Lung (PC-9)
Transcript factors that have rs551980554[chr1:182999051]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182998456 182999256 SOX2 GTRD no Neural Stem Cells (H9) 107850505
chr1 182998735 182999179 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107850509
chr1 182998745 182999083 SOX2 GTRD no Neural Stem Cells (H9) 107850510
chr1 182998751 182999055 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850511
chr1 182998769 182999179 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107850512
chr1 182998775 182999175 FOS UCSC Txn Factor no Conserved 107850513
chr1 182998790 182999110 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850514
chr1 182998809 182999073 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850515
chr1 182998816 182999092 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21358673
chr1 182998816 182999092 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107850516
chr1 182998852 182999119 STAT3 UCSC Txn Factor no Conserved 107850517
Genes associated with rs551980554[chr1:182999051], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More