EnhancerDB
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  3. rs552036140[chr1:42359576]
Enhancers that have rs552036140[chr1:42359576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs552036140[chr1:42359576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42359561 42359577 POU4F3 JASPAR yes 28434752
chr1 42359563 42359577 POU4F1 JASPAR yes 28434753
chr1 42359567 42359579 FOXI1 JASPAR yes 28434755
chr1 42359568 42359580 FOXC2 JASPAR yes 28434756
chr1 42359568 42359582 ONECUT2 JASPAR yes 28434757
chr1 42359568 42359582 ONECUT3 JASPAR yes 28434758
chr1 42359569 42359580 FOXB1 JASPAR yes 28434759
chr1 42359569 42359580 FOXC1 JASPAR yes 28434760
chr1 42359574 42359578 YY1 TRANSFAC yes 28434762
Genes associated with rs552036140[chr1:42359576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More