EnhancerDB
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  3. rs552074001[chr1:232676993]
Enhancers that have rs552074001[chr1:232676993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232662605 232677138 enh12784
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs552074001[chr1:232676993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232676978 232676995 ZNF410 JASPAR yes 36168988
chr1 232676988 232677002 POU1F1 JASPAR yes 36168992
chr1 232676989 232677001 POU3F1 JASPAR yes 36168993
chr1 232676989 232677001 POU3F2 JASPAR yes 36168994
chr1 232676989 232677002 POU3F3 JASPAR yes 36168995
chr1 232676990 232676994 YY1 TRANSFAC yes 36168996
chr1 232676990 232677002 POU2F1 JASPAR yes 36168997
chr1 232676991 232677000 POU3F4 JASPAR yes 36168998
chr1 232676991 232677000 POU5F1B JASPAR yes 36168999
chr1 232676993 232676996 MYB TRANSFAC yes 36169000
Genes associated with rs552074001[chr1:232676993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More