EnhancerDB
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  3. rs552092413[chr16:21638060]
Enhancers that have rs552092413[chr16:21638060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21636005 21645755 enh16601
Liver (HepG2) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Placenta Uterus Epithelial (MCF-7)
chr16 21637887 21638686 vista22114
VISTA
Transcript factors that have rs552092413[chr16:21638060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21637490 21638114 ZNF143 GTRD no Epithelial (MCF-7) 21697358
chr16 21637490 21638114 ZNF143 GTRD no Epithelial (MCF-7) 108187203
chr16 21637919 21638299 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21697359
chr16 21637919 21638299 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108187205
chr16 21637945 21638449 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108187206
chr16 21637972 21638228 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108187207
chr16 21637972 21638243 CEBPB UCSC Txn Factor no Conserved 108187208
chr16 21637974 21638238 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108187209
chr16 21637998 21639172 ZNF143 GTRD no Epithelial (MCF-7) 21697360
chr16 21637998 21639172 ZNF143 GTRD no Epithelial (MCF-7) 108187210
chr16 21638019 21638243 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21697361
chr16 21638019 21638243 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108187211
chr16 21638052 21638064 HNF1B JASPAR yes 9935499
chr16 21638052 21638064 HNF1B JASPAR yes 49353567
chr16 21638058 21638068 ALX3 JASPAR yes 9935500
chr16 21638058 21638068 EMX1 JASPAR yes 9935501
chr16 21638058 21638068 HOXB2 JASPAR yes 9935502
chr16 21638058 21638068 HOXB3 JASPAR yes 9935503
chr16 21638058 21638068 MEOX2 JASPAR yes 9935504
chr16 21638058 21638068 MNX1 JASPAR yes 9935505
chr16 21638058 21638068 ALX3 JASPAR yes 49353568
chr16 21638058 21638068 EMX1 JASPAR yes 49353569
chr16 21638058 21638068 HOXB2 JASPAR yes 49353570
chr16 21638058 21638068 HOXB3 JASPAR yes 49353571
chr16 21638058 21638068 MEOX2 JASPAR yes 49353572
chr16 21638058 21638068 MNX1 JASPAR yes 49353573
chr16 21638059 21638067 LMX1A JASPAR yes 9935506
chr16 21638059 21638067 LMX1B JASPAR yes 9935507
chr16 21638059 21638067 NKX6-1 JASPAR yes 9935508
chr16 21638059 21638067 NKX6-2 JASPAR yes 9935509
chr16 21638059 21638067 PDX1 JASPAR yes 9935510
chr16 21638059 21638067 VAX1 JASPAR yes 9935511
chr16 21638059 21638067 VAX2 JASPAR yes 9935512
chr16 21638059 21638067 VSX1 JASPAR yes 9935513
chr16 21638059 21638067 LMX1A JASPAR yes 49353574
chr16 21638059 21638067 LMX1B JASPAR yes 49353575
chr16 21638059 21638067 NKX6-1 JASPAR yes 49353576
chr16 21638059 21638067 NKX6-2 JASPAR yes 49353577
chr16 21638059 21638067 PDX1 JASPAR yes 49353578
chr16 21638059 21638067 VAX1 JASPAR yes 49353579
chr16 21638059 21638067 VAX2 JASPAR yes 49353580
chr16 21638059 21638067 VSX1 JASPAR yes 49353581
Genes associated with rs552092413[chr16:21638060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More