EnhancerDB
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  3. rs552125508[chr1:42354747]
Enhancers that have rs552125508[chr1:42354747]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs552125508[chr1:42354747]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42354460 42354937 TCF7L2 GTRD no Colon (HCT116) 21325361
chr1 42354730 42354750 RREB1 JASPAR yes 28434026
chr1 42354732 42354752 RREB1 JASPAR yes 28434027
chr1 42354733 42354748 RUNX2 JASPAR yes 28434028
chr1 42354734 42354754 RREB1 JASPAR yes 28434029
chr1 42354736 42354756 RREB1 JASPAR yes 28434030
chr1 42354742 42354757 RUNX2 JASPAR yes 28434031
chr1 42354743 42354763 RREB1 JASPAR yes 28434032
Genes associated with rs552125508[chr1:42354747], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More