EnhancerDB
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  3. rs552183022[chr12:108999625]
Enhancers that have rs552183022[chr12:108999625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552183022[chr12:108999625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 108999369 108999679 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570955
chr12 108999558 108999928 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570957
chr12 108999621 108999626 SP1 TRANSFAC yes 123605568
chr12 108999622 108999627 SP1 TRANSFAC yes 123605569
chr12 108999623 108999643 RREB1 JASPAR yes 123605570
Genes associated with rs552183022[chr12:108999625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More