EnhancerDB
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  3. rs552260760[chr1:205511013]
Enhancers that have rs552260760[chr1:205511013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205502445 205516735 enh12593
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Astrocyte Lung Stomach Placenta Lung (PC-9) Pancreas Heart
Transcript factors that have rs552260760[chr1:205511013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205510130 205511100 ZNF143 GTRD no Epithelial (MCF-7) 21372073
chr1 205510130 205511100 ZNF143 GTRD no Epithelial (MCF-7) 107862314
chr1 205510160 205511073 ZNF143 GTRD no Epithelial (MCF-7) 21372074
chr1 205510160 205511073 ZNF143 GTRD no Epithelial (MCF-7) 107862315
chr1 205510162 205511170 ZNF143 GTRD no Epithelial (MCF-7) 21372075
chr1 205510162 205511170 ZNF143 GTRD no Epithelial (MCF-7) 107862316
chr1 205511004 205511016 PKNOX1 JASPAR yes 34769071
chr1 205511004 205511016 PKNOX2 JASPAR yes 34769072
chr1 205511004 205511016 TGIF1 JASPAR yes 34769073
chr1 205511004 205511016 TGIF2 JASPAR yes 34769074
chr1 205511004 205511022 IRF2 JASPAR yes 34769075
chr1 205511009 205511017 MEIS2 JASPAR yes 34769076
chr1 205511009 205511017 MEIS3 JASPAR yes 34769077
chr1 205511009 205511021 IRF1 JASPAR yes 34769078
chr1 205511009 205511023 IRF7 JASPAR yes 34769079
chr1 205511009 205511024 IRF9 JASPAR yes 34769080
chr1 205511010 205511014 NFE TRANSFAC yes 34769081
chr1 205511013 205511028 STAT2 JASPAR yes 34769082
Genes associated with rs552260760[chr1:205511013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More