EnhancerDB
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  3. rs552270022[chr10:27838748]
Enhancers that have rs552270022[chr10:27838748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 27836185 27840335 enh67452
Neural Stem Cells (H9)
Transcript factors that have rs552270022[chr10:27838748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 27838733 27838749 POU4F2 JASPAR yes 126187570
chr10 27838733 27838749 POU4F3 JASPAR yes 126187571
chr10 27838734 27838749 FOXA1 JASPAR yes 126187573
chr10 27838735 27838749 POU4F1 JASPAR yes 126187575
chr10 27838735 27838750 FOXP1 JASPAR yes 126187576
chr10 27838735 27838750 HNF1A JASPAR yes 126187577
chr10 27838736 27838748 FOXC2 JASPAR yes 126187578
chr10 27838736 27838750 ONECUT2 JASPAR yes 126187579
chr10 27838736 27838750 ONECUT3 JASPAR yes 126187580
chr10 27838737 27838748 FOXB1 JASPAR yes 126187581
chr10 27838737 27838748 FOXC1 JASPAR yes 126187582
chr10 27838737 27838748 PROP1 JASPAR yes 126187583
chr10 27838738 27838753 FOXA1 JASPAR yes 126187585
chr10 27838739 27838751 FOXI1 JASPAR yes 126187586
chr10 27838739 27838754 FOXP1 JASPAR yes 126187587
chr10 27838740 27838752 FOXC2 JASPAR yes 126187588
chr10 27838740 27838754 ONECUT2 JASPAR yes 126187589
chr10 27838740 27838754 ONECUT3 JASPAR yes 126187590
chr10 27838741 27838752 FOXB1 JASPAR yes 126187591
chr10 27838741 27838752 FOXC1 JASPAR yes 126187592
chr10 27838744 27838756 MEF2D JASPAR yes 126187594
chr10 27838746 27838750 YY1 TRANSFAC yes 126187595
Genes associated with rs552270022[chr10:27838748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More