EnhancerDB
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  3. rs552338674[chr1:116857546]
Enhancers that have rs552338674[chr1:116857546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552338674[chr1:116857546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116857095 116857639 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332075
chr1 116857541 116857562 IRF1 JASPAR yes 31793447
chr1 116857543 116857558 STAT2 JASPAR yes 31793448
chr1 116857544 116857555 PROP1 JASPAR yes 31793449
chr1 116857545 116857559 IRF7 JASPAR yes 31793450
Genes associated with rs552338674[chr1:116857546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More