EnhancerDB
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  3. rs552357430[chr1:200303947]
Enhancers that have rs552357430[chr1:200303947]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs552357430[chr1:200303947]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200303628 200304098 ZNF143 GTRD no Epithelial (MCF-7) 21363079
chr1 200303713 200304099 ZNF143 GTRD no Epithelial (MCF-7) 21363080
chr1 200303838 200304178 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363081
chr1 200303863 200304153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363082
chr1 200303865 200304155 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21363083
chr1 200303886 200304162 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21363084
chr1 200303925 200304125 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21363085
chr1 200303935 200303950 RUNX2 JASPAR yes 34435811
chr1 200303939 200303959 RREB1 JASPAR yes 34435812
chr1 200303945 200303960 FOXP1 JASPAR yes 34435813
chr1 200303946 200303961 FOXP1 JASPAR yes 34435814
chr1 200303947 200303962 FOXP1 JASPAR yes 34435815
Genes associated with rs552357430[chr1:200303947], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More