EnhancerDB
  1. Home
  2. SNP
  3. rs552449080[chr16:88571516]
Enhancers that have rs552449080[chr16:88571516]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88556185 88579980 enh52393
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Pancreas Heart
Transcript factors that have rs552449080[chr16:88571516]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88571505 88571517 TAL1 JASPAR yes 12292346
chr16 88571507 88571517 MSC JASPAR yes 12292347
chr16 88571507 88571517 TFAP4 JASPAR yes 12292348
chr16 88571507 88571519 TAL1 JASPAR yes 12292349
chr16 88571514 88571519 SP1 TRANSFAC yes 12292350
Genes associated with rs552449080[chr16:88571516], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More