EnhancerDB
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  3. rs552454182[chr19:14661308]
Enhancers that have rs552454182[chr19:14661308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14658964 14673635 enh5022
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 14661096 14661426 vista28765
VISTA
Transcript factors that have rs552454182[chr19:14661308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14660967 14661431 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21853729
chr19 14660967 14661431 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108391954
chr19 14660998 14661654 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21853730
chr19 14660998 14661654 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108391958
chr19 14660999 14661495 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391959
chr19 14661008 14661318 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21853731
chr19 14661008 14661318 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108391960
chr19 14661017 14661473 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391961
chr19 14661120 14661490 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391963
chr19 14661125 14661405 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391964
chr19 14661158 14661562 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391965
chr19 14661192 14661382 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391966
chr19 14661206 14661794 ZNF274 GTRD no Bone Marrow (K562) 108391967
chr19 14661215 14661860 ZNF274 GTRD no Blood (GM12878) 108391968
chr19 14661235 14661479 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391969
chr19 14661250 14661440 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21853732
chr19 14661250 14661440 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108391970
chr19 14661305 14661617 ZNF274 GTRD no Bone Marrow (K562) 108391971
Genes associated with rs552454182[chr19:14661308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More