EnhancerDB
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  3. rs552501280[chr6:25406931]
Enhancers that have rs552501280[chr6:25406931]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25402146 25419595 enh49068
Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Adrenal Thymus Stomach
chr6 25406864 25407254 vista51384
VISTA
Transcript factors that have rs552501280[chr6:25406931]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25406926 25406938 TAL1 JASPAR yes 70337157
chr6 25406926 25406938 TAL1 JASPAR yes 100856352
chr6 25406927 25406939 BHLHE23 JASPAR yes 70337158
chr6 25406927 25406939 BHLHE23 JASPAR yes 100856353
chr6 25406928 25406938 BHLHE22 JASPAR yes 70337159
chr6 25406928 25406938 NEUROD2 JASPAR yes 70337160
chr6 25406928 25406938 OLIG1 JASPAR yes 70337161
chr6 25406928 25406938 OLIG2 JASPAR yes 70337162
chr6 25406928 25406938 OLIG3 JASPAR yes 70337163
chr6 25406928 25406938 BHLHE22 JASPAR yes 100856354
chr6 25406928 25406938 NEUROD2 JASPAR yes 100856355
chr6 25406928 25406938 OLIG1 JASPAR yes 100856356
chr6 25406928 25406938 OLIG2 JASPAR yes 100856357
chr6 25406928 25406938 OLIG3 JASPAR yes 100856358
chr6 25406928 25406940 TAL1 JASPAR yes 70337164
chr6 25406928 25406940 TAL1 JASPAR yes 100856359
Genes associated with rs552501280[chr6:25406931], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More