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- rs552561954[chr1:116454039]
Enhancers that have rs552561954[chr1:116454039]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
116453033 |
116457183 |
enh67110 |
|
|
Transcript factors that have rs552561954[chr1:116454039]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
116451406
|
116455348
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21331423
|
|
|
chr1
|
116451419
|
116455350
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21331424
|
|
|
chr1
|
116451486
|
116455531
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21331426
|
|
|
chr1
|
116454033
|
116454048
|
FOXP1
|
JASPAR
|
yes
|
|
31765908
|
|
|
chr1
|
116454034
|
116454049
|
FOXP1
|
JASPAR
|
yes
|
|
31765909
|
|
|
chr1
|
116454034
|
116454055
|
IRF1
|
JASPAR
|
yes
|
|
31765910
|
|
|
chr1
|
116454035
|
116454050
|
FOXP1
|
JASPAR
|
yes
|
|
31765911
|
|
|
chr1
|
116454038
|
116454053
|
STAT2
|
JASPAR
|
yes
|
|
31765912
|
|
Genes associated with rs552561954[chr1:116454039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |