EnhancerDB
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  3. rs552583260[chr19:14673018]
Enhancers that have rs552583260[chr19:14673018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14658964 14673635 enh5022
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552583260[chr19:14673018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14673013 14673025 PKNOX2 JASPAR yes 112579753
chr19 14673013 14673025 TGIF1 JASPAR yes 112579754
chr19 14673013 14673026 ZBTB18 JASPAR yes 112579755
Genes associated with rs552583260[chr19:14673018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More