EnhancerDB
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  3. rs552588642[chr10:23662839]
Enhancers that have rs552588642[chr10:23662839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 23646720 23666660 enh58256
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (GM12878) Muscle (A673) Thyroid Peripheral Blood (MM.1S) Blood (T-cell) Heart
Transcript factors that have rs552588642[chr10:23662839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 23662820 23662841 ZNF263 JASPAR yes 126012013
chr10 23662821 23662842 IRF1 JASPAR yes 126012014
chr10 23662821 23662842 ZNF263 JASPAR yes 126012015
chr10 23662825 23662846 IRF1 JASPAR yes 126012016
chr10 23662827 23662848 IRF1 JASPAR yes 126012017
chr10 23662831 23662846 PRDM1 JASPAR yes 126012018
chr10 23662831 23662846 STAT2 JASPAR yes 126012019
chr10 23662831 23662852 IRF1 JASPAR yes 126012020
chr10 23662833 23662848 IRF9 JASPAR yes 126012021
chr10 23662834 23662848 IRF7 JASPAR yes 126012022
chr10 23662835 23662849 STAT1 JASPAR yes 126012023
chr10 23662835 23662850 PRDM1 JASPAR yes 126012024
chr10 23662835 23662850 STAT2 JASPAR yes 126012025
Genes associated with rs552588642[chr10:23662839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More