EnhancerDB
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  3. rs552600153[chr1:41175663]
Enhancers that have rs552600153[chr1:41175663]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41162745 41176935 enh274
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs552600153[chr1:41175663]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41175659 41175665 LEF1 TRANSFAC yes 28337571
chr1 41175659 41175665 SOX10 JASPAR yes 28337572
chr1 41175661 41175669 FOXO3 JASPAR yes 28337573
Genes associated with rs552600153[chr1:41175663], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More