EnhancerDB
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  3. rs552611637[chr1:178576425]
Enhancers that have rs552611637[chr1:178576425]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178572424 178586155 enh756
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs552611637[chr1:178576425]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178575652 178576522 ZNF274 GTRD no Blood (GM12878) 21352646
chr1 178575766 178576445 ZNF274 GTRD no Cervix (HeLa-S3) 21352648
chr1 178575986 178576426 ZNF274 GTRD no Cervix (HeLa-S3) 21352654
chr1 178576085 178576620 ZNF274 GTRD no Cervix (HeLa-S3) 21352655
chr1 178576418 178576428 HOXC10 JASPAR yes 33427666
chr1 178576418 178576428 HOXD11 JASPAR yes 33427667
chr1 178576418 178576429 HOXA10 JASPAR yes 33427668
chr1 178576418 178576429 HOXC11 JASPAR yes 33427669
chr1 178576418 178576429 HOXC12 JASPAR yes 33427670
chr1 178576418 178576429 HOXC13 JASPAR yes 33427671
chr1 178576419 178576428 CDX1 JASPAR yes 33427672
chr1 178576419 178576430 CDX2 JASPAR yes 33427673
Genes associated with rs552611637[chr1:178576425], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More