EnhancerDB
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Enhancers that have rs552641258[chr12:115889901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 115885905 115897376 enh15021
Placenta Neural Stem Cells (H9) Liver (HepG2) Large Intestine
chr12 115889491 115890073 vista14995
VISTA
Transcript factors that have rs552641258[chr12:115889901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 115889522 115889942 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21575823
chr12 115889522 115889942 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108060979
chr12 115889662 115889978 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21575824
chr12 115889662 115889978 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108060980
chr12 115889671 115890047 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108060981
chr12 115889701 115890012 ZNF274 GTRD no Liver (HepG2) 21575825
chr12 115889701 115890012 ZNF274 GTRD no Liver (HepG2) 108060982
chr12 115889716 115890106 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21575826
chr12 115889716 115890106 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108060983
chr12 115889746 115890070 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108060984
chr12 115889757 115890133 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21575827
chr12 115889757 115890133 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108060985
chr12 115889764 115890064 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21575828
chr12 115889764 115890064 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108060986
chr12 115889769 115890109 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21575829
chr12 115889769 115890109 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108060987
chr12 115889806 115890082 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21575830
chr12 115889806 115890082 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108060988
chr12 115889898 115889917 CTCF JASPAR yes 82481843
chr12 115889898 115889917 CTCF JASPAR yes 123926119
Genes associated with rs552641258[chr12:115889901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More