EnhancerDB
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  3. rs552734143[chr2:40259168]
Enhancers that have rs552734143[chr2:40259168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 40254305 40266759 enh33254
Skin (Keratinocyte) Prostate (PC-3) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube)
Transcript factors that have rs552734143[chr2:40259168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 40259150 40259171 IRF1 JASPAR yes 73241344
chr2 40259151 40259172 IRF1 JASPAR yes 73241346
chr2 40259152 40259173 IRF1 JASPAR yes 73241348
chr2 40259153 40259168 FOXP1 JASPAR yes 73241349
chr2 40259153 40259174 IRF1 JASPAR yes 73241350
chr2 40259154 40259169 FOXP1 JASPAR yes 73241351
chr2 40259154 40259175 IRF1 JASPAR yes 73241352
chr2 40259155 40259170 FOXP1 JASPAR yes 73241353
chr2 40259155 40259176 IRF1 JASPAR yes 73241354
chr2 40259156 40259171 FOXP1 JASPAR yes 73241355
chr2 40259156 40259177 IRF1 JASPAR yes 73241356
chr2 40259157 40259172 FOXP1 JASPAR yes 73241357
chr2 40259158 40259173 FOXP1 JASPAR yes 73241358
chr2 40259158 40259179 IRF1 JASPAR yes 73241359
chr2 40259159 40259174 FOXP1 JASPAR yes 73241360
chr2 40259160 40259175 FOXP1 JASPAR yes 73241361
chr2 40259165 40259179 RORA JASPAR yes 73241362
chr2 40259168 40259178 RORA JASPAR yes 73241363
Genes associated with rs552734143[chr2:40259168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More