EnhancerDB
  1. Home
  2. SNP
  3. rs552864000[chr16:19394486]
Enhancers that have rs552864000[chr16:19394486]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19385025 19410955 enh16592
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs552864000[chr16:19394486]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19392870 19394564 ZNF274 GTRD no Cervix (HeLa-S3) 21695374
chr16 19393199 19394545 ZNF274 GTRD no Bone Marrow (K562) 21695379
chr16 19394475 19394488 ELF1 JASPAR yes 9864660
chr16 19394477 19394494 PAX9 JASPAR yes 9864661
Genes associated with rs552864000[chr16:19394486], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More