EnhancerDB
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  3. rs552868309[chr2:239770045]
Enhancers that have rs552868309[chr2:239770045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 239767765 239780469 enh19409
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Heart
Transcript factors that have rs552868309[chr2:239770045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 239770037 239770052 TFAP2A JASPAR yes 82193203
chr2 239770039 239770054 TFAP2C JASPAR yes 82193204
chr2 239770040 239770051 TFAP2A JASPAR yes 82193205
chr2 239770040 239770051 TFAP2B JASPAR yes 82193206
chr2 239770040 239770051 TFAP2C JASPAR yes 82193207
chr2 239770040 239770052 TFAP2A JASPAR yes 82193208
chr2 239770040 239770052 TFAP2B JASPAR yes 82193209
chr2 239770040 239770052 TFAP2C JASPAR yes 82193210
chr2 239770041 239770050 TFAP2A JASPAR yes 82193211
Genes associated with rs552868309[chr2:239770045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More