EnhancerDB
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  3. rs552890996[chr1:18999101]
Enhancers that have rs552890996[chr1:18999101]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 18991138 18999535 enh61803
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs552890996[chr1:18999101]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 18999084 18999105 IRF1 JASPAR yes 27151026
chr1 18999085 18999106 IRF1 JASPAR yes 27151028
chr1 18999086 18999101 STAT2 JASPAR yes 27151030
chr1 18999086 18999107 IRF1 JASPAR yes 27151031
chr1 18999087 18999102 FOXP1 JASPAR yes 27151032
chr1 18999087 18999108 IRF1 JASPAR yes 27151033
chr1 18999088 18999109 IRF1 JASPAR yes 27151034
chr1 18999089 18999104 FOXP1 JASPAR yes 27151035
chr1 18999089 18999110 IRF1 JASPAR yes 27151036
chr1 18999090 18999105 FOXP1 JASPAR yes 27151037
chr1 18999090 18999111 IRF1 JASPAR yes 27151038
chr1 18999091 18999106 FOXP1 JASPAR yes 27151039
chr1 18999091 18999112 IRF1 JASPAR yes 27151040
chr1 18999092 18999107 FOXP1 JASPAR yes 27151041
chr1 18999092 18999113 IRF1 JASPAR yes 27151042
chr1 18999093 18999108 FOXP1 JASPAR yes 27151043
chr1 18999094 18999109 FOXP1 JASPAR yes 27151044
chr1 18999095 18999110 FOXP1 JASPAR yes 27151045
chr1 18999096 18999111 FOXP1 JASPAR yes 27151046
chr1 18999097 18999112 FOXP1 JASPAR yes 27151047
chr1 18999098 18999113 FOXP1 JASPAR yes 27151048
chr1 18999099 18999114 FOXP1 JASPAR yes 27151049
Genes associated with rs552890996[chr1:18999101], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More