EnhancerDB
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  3. rs552925970[chr1:46340055]
Enhancers that have rs552925970[chr1:46340055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46325665 46343935 enh326
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs552925970[chr1:46340055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46340047 46340058 FOXB1 JASPAR yes 28624457
chr1 46340047 46340059 POU3F1 JASPAR yes 28624458
chr1 46340047 46340060 POU3F3 JASPAR yes 28624459
chr1 46340048 46340060 POU2F1 JASPAR yes 28624460
chr1 46340049 46340058 POU3F4 JASPAR yes 28624461
chr1 46340049 46340058 POU5F1B JASPAR yes 28624462
Genes associated with rs552925970[chr1:46340055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More