EnhancerDB
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  3. rs552936223[chr1:178583224]
Enhancers that have rs552936223[chr1:178583224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178572424 178586155 enh756
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs552936223[chr1:178583224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178583219 178583228 RUNX2 JASPAR yes 33428670
chr1 178583219 178583229 RUNX3 JASPAR yes 33428671
chr1 178583219 178583230 RUNX1 JASPAR yes 33428672
Genes associated with rs552936223[chr1:178583224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More