EnhancerDB
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  3. rs552947038[chr19:10347861]
Enhancers that have rs552947038[chr19:10347861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10331225 10355975 enh5000
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs552947038[chr19:10347861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10346247 10348576 ZNF274 GTRD no Blood (GM12878) 21848479
chr19 10346247 10348576 ZNF274 GTRD no Blood (GM12878) 108382959
chr19 10347575 10348775 ZNF274 GTRD no Blood (GM12878) 21848560
chr19 10347601 10347951 ZNF274 GTRD no Blood (GM12878) 21848561
chr19 10347603 10348207 ZNF274 GTRD no Blood (GM12878) 21848562
chr19 10347606 10348163 ZNF274 GTRD no Blood (GM12878) 21848563
chr19 10347667 10348150 ZNF274 GTRD no Blood (GM12878) 21848564
chr19 10347676 10348172 ZNF274 GTRD no Blood (GM12878) 21848565
chr19 10347676 10348654 ZNF274 GTRD no Blood (GM12878) 21848566
chr19 10347678 10348291 ZNF274 GTRD no Blood (GM12878) 21848567
chr19 10347846 10347867 ZNF263 JASPAR yes 112415639
chr19 10347853 10347865 HINFP JASPAR yes 112415640
chr19 10347857 10347865 SP1 TRANSFAC yes 112415641
chr19 10347857 10347867 SP1 JASPAR yes 112415642
Genes associated with rs552947038[chr19:10347861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More