-
Home
- SNP
- rs552998611[chr16:89708403]
Enhancers that have rs552998611[chr16:89708403]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
89705171 |
89710743 |
enh52396 |
|
|
Transcript factors that have rs552998611[chr16:89708403]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
89704504
|
89713776
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21738779
|
|
|
chr16
|
89704504
|
89713776
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21738780
|
|
|
chr16
|
89704624
|
89710143
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21738781
|
|
|
chr16
|
89704854
|
89713791
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21738782
|
|
|
chr16
|
89704854
|
89713791
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21738783
|
|
|
chr16
|
89706050
|
89709613
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21738816
|
|
|
chr16
|
89706075
|
89713067
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21738817
|
|
|
chr16
|
89707634
|
89709768
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21738830
|
|
|
chr16
|
89708103
|
89708536
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21738842
|
|
|
chr16
|
89708399
|
89708419
|
RREB1
|
JASPAR
|
yes
|
|
12354781
|
|
Genes associated with rs552998611[chr16:89708403], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |