EnhancerDB
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  3. rs553000554[chr19:1867651]
Enhancers that have rs553000554[chr19:1867651]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1850045 1876795 enh4955
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Pancreas Uterus Thymus
Transcript factors that have rs553000554[chr19:1867651]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1866558 1867826 ZNF274 GTRD no Liver (HepG2) 21833035
chr19 1866662 1869411 ZNF274 GTRD no Bone Marrow (K562) 21833037
chr19 1866748 1867666 ZNF274 GTRD no Liver (HepG2) 21833038
chr19 1866809 1868594 ZNF274 GTRD no Bone Marrow (K562) 21833043
chr19 1866824 1867712 ZNF274 GTRD no Liver (HepG2) 21833044
chr19 1866958 1867691 ZNF274 GTRD no Blood (GM12878) 21833058
chr19 1867279 1867950 ZNF274 GTRD no Blood (GM12878) 21833065
chr19 1867377 1867670 ZNF274 GTRD no Bone Marrow (K562) 21833066
chr19 1867403 1868066 ZNF274 GTRD no Bone Marrow (K562) 21833067
chr19 1867630 1868344 ZNF274 GTRD no Liver (HepG2) 21833068
chr19 1867641 1867651 SREBF2 JASPAR yes 112034715
chr19 1867646 1867659 NR2F1 JASPAR yes 112034717
chr19 1867647 1867655 CREB1 JASPAR yes 112034718
chr19 1867648 1867666 RARA JASPAR yes 112034719
chr19 1867650 1867654 ESR1 TRANSFAC yes 112034720
Genes associated with rs553000554[chr19:1867651], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More