EnhancerDB
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  3. rs553022873[chr1:172942860]
Enhancers that have rs553022873[chr1:172942860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs553022873[chr1:172942860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172942845 172942863 SRF JASPAR yes 33173747
chr1 172942848 172942862 TCF7L2 JASPAR yes 33173748
chr1 172942848 172942863 LEF1 JASPAR yes 33173749
Genes associated with rs553022873[chr1:172942860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More