EnhancerDB
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  3. rs553139527[chr19:4142341]
Enhancers that have rs553139527[chr19:4142341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4134682 4148106 enh52837
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Stomach
Transcript factors that have rs553139527[chr19:4142341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4142341 4142353 IRF1 JASPAR yes 112165397
chr19 4142341 4142356 FOXP1 JASPAR yes 112165398
chr19 4142341 4142362 IRF1 JASPAR yes 112165399
Genes associated with rs553139527[chr19:4142341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More