EnhancerDB
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  3. rs553147965[chr18:55517196]
Enhancers that have rs553147965[chr18:55517196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55498005 55517815 enh17733
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs553147965[chr18:55517196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55516218 55517740 ZNF274 GTRD no Bone Marrow (K562) 21823725
chr18 55516531 55517565 ZNF274 GTRD no Bone Marrow (K562) 21823726
chr18 55516857 55517837 ZNF274 GTRD no Bone Marrow (K562) 21823727
chr18 55516865 55517506 ZNF274 GTRD no Bone Marrow (K562) 21823728
chr18 55516888 55517377 ZNF274 GTRD no Bone Marrow (K562) 21823729
chr18 55516924 55517588 ZNF274 GTRD no Bone Marrow (K562) 21823730
chr18 55516959 55517551 ZNF274 GTRD no Bone Marrow (K562) 21823731
chr18 55516965 55517326 ZNF274 GTRD no Bone Marrow (K562) 21823732
chr18 55516997 55517457 ZNF274 GTRD no Bone Marrow (K562) 21823733
chr18 55517001 55517425 ZNF274 GTRD no Bone Marrow (K562) 21823734
chr18 55517003 55517378 ZNF274 GTRD no Bone Marrow (K562) 21823735
chr18 55517019 55517573 ZNF274 GTRD no Bone Marrow (K562) 21823736
chr18 55517025 55517524 ZNF274 GTRD no Bone Marrow (K562) 21823737
chr18 55517079 55517475 ZNF274 GTRD no Bone Marrow (K562) 21823738
chr18 55517093 55517434 ZNF274 GTRD no Bone Marrow (K562) 21823739
chr18 55517117 55517515 ZNF274 GTRD no Bone Marrow (K562) 21823740
chr18 55517185 55517196 PHOX2A JASPAR yes 110892988
chr18 55517185 55517196 PROP1 JASPAR yes 110892989
chr18 55517189 55517202 DUXA JASPAR yes 110892990
chr18 55517190 55517201 DUX4 JASPAR yes 110892991
chr18 55517195 55517210 IRF9 JASPAR yes 110892992
Genes associated with rs553147965[chr18:55517196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More