EnhancerDB
  1. Home
  2. SNP
  3. rs553174196[chr1:173425422]
Enhancers that have rs553174196[chr1:173425422]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173419185 173426575 enh61930
Cervix (HeLa-S3) Esophagus Stomach Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs553174196[chr1:173425422]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173424522 173425617 ZNF274 GTRD no Cervix (HeLa-S3) 21351814
chr1 173424662 173425463 ZNF274 GTRD no Cervix (HeLa-S3) 21351820
chr1 173425409 173425429 RREB1 JASPAR yes 33203539
chr1 173425410 173425422 FOXI1 JASPAR yes 33203540
chr1 173425410 173425430 RREB1 JASPAR yes 33203541
chr1 173425411 173425426 FOXP1 JASPAR yes 33203542
chr1 173425413 173425433 RREB1 JASPAR yes 33203543
chr1 173425414 173425426 FOXI1 JASPAR yes 33203544
chr1 173425414 173425434 RREB1 JASPAR yes 33203545
chr1 173425418 173425433 FOXP1 JASPAR yes 33203546
chr1 173425418 173425439 IRF1 JASPAR yes 33203547
chr1 173425419 173425434 FOXP1 JASPAR yes 33203548
chr1 173425420 173425435 FOXP1 JASPAR yes 33203549
Genes associated with rs553174196[chr1:173425422], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More