EnhancerDB
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  3. rs553257125[chr1:204456338]
Enhancers that have rs553257125[chr1:204456338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204440545 204458655 enh12585
Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Liver Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs553257125[chr1:204456338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204456325 204456343 ESR2 JASPAR yes 34706289
chr1 204456332 204456350 RARA JASPAR yes 34706291
chr1 204456338 204456349 E2F6 JASPAR yes 34706292
Genes associated with rs553257125[chr1:204456338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More