EnhancerDB
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  3. rs553282019[chr12:109007481]
Enhancers that have rs553282019[chr12:109007481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553282019[chr12:109007481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109007185 109007569 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570984
chr12 109007335 109007611 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570985
chr12 109007474 109007484 RELA JASPAR yes 123606844
chr12 109007474 109007484 REL JASPAR yes 123606845
chr12 109007474 109007485 NFKB1 JASPAR yes 123606846
chr12 109007474 109007487 NFKB1 JASPAR yes 123606847
chr12 109007474 109007487 NFKB2 JASPAR yes 123606848
chr12 109007475 109007485 NFKB1 JASPAR yes 123606849
chr12 109007475 109007485 RELA JASPAR yes 123606850
chr12 109007475 109007486 NFKB1 JASPAR yes 123606851
chr12 109007476 109007486 NFKB1 JASPAR yes 123606852
chr12 109007476 109007486 RELA JASPAR yes 123606853
chr12 109007476 109007486 REL JASPAR yes 123606854
chr12 109007478 109007492 E2F7 JASPAR yes 123606855
Genes associated with rs553282019[chr12:109007481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More