EnhancerDB
  1. Home
  2. SNP
  3. rs553285057[chr1:117016291]
Enhancers that have rs553285057[chr1:117016291]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553285057[chr1:117016291]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117015421 117016377 ZNF143 GTRD no Epithelial (MCF-7) 21332809
chr1 117015437 117016480 ZNF143 GTRD no Epithelial (MCF-7) 21332810
chr1 117015632 117016393 ZNF143 GTRD no Epithelial (MCF-7) 21332815
chr1 117015661 117016370 ZNF143 GTRD no Epithelial (MCF-7) 21332816
chr1 117016272 117016293 IRF1 JASPAR yes 31810617
chr1 117016273 117016294 IRF1 JASPAR yes 31810619
chr1 117016274 117016295 IRF1 JASPAR yes 31810621
chr1 117016278 117016299 IRF1 JASPAR yes 31810622
chr1 117016279 117016294 FOXP1 JASPAR yes 31810623
chr1 117016279 117016300 IRF1 JASPAR yes 31810624
chr1 117016280 117016301 IRF1 JASPAR yes 31810625
chr1 117016281 117016296 FOXP1 JASPAR yes 31810626
chr1 117016281 117016302 IRF1 JASPAR yes 31810627
chr1 117016282 117016303 IRF1 JASPAR yes 31810628
chr1 117016283 117016298 FOXP1 JASPAR yes 31810629
chr1 117016283 117016304 IRF1 JASPAR yes 31810630
chr1 117016284 117016299 FOXP1 JASPAR yes 31810631
chr1 117016284 117016305 IRF1 JASPAR yes 31810632
chr1 117016285 117016300 FOXP1 JASPAR yes 31810633
chr1 117016285 117016306 IRF1 JASPAR yes 31810634
chr1 117016286 117016301 FOXP1 JASPAR yes 31810635
chr1 117016286 117016307 IRF1 JASPAR yes 31810636
chr1 117016287 117016302 FOXP1 JASPAR yes 31810637
chr1 117016288 117016303 FOXP1 JASPAR yes 31810638
chr1 117016289 117016304 FOXP1 JASPAR yes 31810639
chr1 117016290 117016305 FOXP1 JASPAR yes 31810640
chr1 117016291 117016306 FOXP1 JASPAR yes 31810641
Genes associated with rs553285057[chr1:117016291], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More