EnhancerDB
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  3. rs553348978[chr17:60866456]
Enhancers that have rs553348978[chr17:60866456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60862845 60872626 enh17279
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553348978[chr17:60866456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60866435 60866456 IRF1 JASPAR yes 55212670
chr17 60866436 60866457 IRF1 JASPAR yes 55212672
chr17 60866437 60866458 IRF1 JASPAR yes 55212674
chr17 60866439 60866460 IRF1 JASPAR yes 55212677
chr17 60866440 60866461 IRF1 JASPAR yes 55212679
chr17 60866441 60866456 FOXP1 JASPAR yes 55212680
Genes associated with rs553348978[chr17:60866456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More