EnhancerDB
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  3. rs553367078[chr1:200151555]
Enhancers that have rs553367078[chr1:200151555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200146725 200155834 enh27413
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Pancreas Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs553367078[chr1:200151555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200149128 200152220 ZNF143 GTRD no Epithelial (MCF-7) 21362567
chr1 200149202 200152250 ZNF143 GTRD no Epithelial (MCF-7) 21362568
chr1 200149518 200153004 ZNF143 GTRD no Epithelial (MCF-7) 21362569
chr1 200150022 200151577 ZNF143 GTRD no Epithelial (MCF-7) 21362570
chr1 200150141 200151561 ZNF143 GTRD no Epithelial (MCF-7) 21362572
chr1 200150372 200151625 ZNF143 GTRD no Epithelial (MCF-7) 21362581
chr1 200150420 200151565 ZNF143 GTRD no Epithelial (MCF-7) 21362588
chr1 200151540 200151555 FOXP1 JASPAR yes 34420483
chr1 200151541 200151556 FOXP1 JASPAR yes 34420484
chr1 200151541 200151562 IRF1 JASPAR yes 34420485
chr1 200151542 200151557 FOXP1 JASPAR yes 34420486
chr1 200151542 200151563 IRF1 JASPAR yes 34420487
chr1 200151543 200151558 FOXP1 JASPAR yes 34420488
chr1 200151543 200151564 IRF1 JASPAR yes 34420489
chr1 200151544 200151559 FOXP1 JASPAR yes 34420490
chr1 200151544 200151565 IRF1 JASPAR yes 34420491
chr1 200151545 200151560 FOXP1 JASPAR yes 34420492
chr1 200151547 200151562 FOXP1 JASPAR yes 34420493
chr1 200151548 200151569 IRF1 JASPAR yes 34420494
chr1 200151549 200151564 FOXP1 JASPAR yes 34420495
chr1 200151549 200151570 IRF1 JASPAR yes 34420496
chr1 200151553 200151574 IRF1 JASPAR yes 34420497
chr1 200151554 200151569 FOXP1 JASPAR yes 34420498
chr1 200151554 200151575 IRF1 JASPAR yes 34420499
Genes associated with rs553367078[chr1:200151555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More