-
Home
- SNP
- rs553397258[chr17:53429778]
Enhancers that have rs553397258[chr17:53429778]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
53416225 |
53430362 |
enh17230 |
|
|
Transcript factors that have rs553397258[chr17:53429778]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
53429760
|
53429781
|
IRF1
|
JASPAR
|
yes
|
|
54846969
|
|
|
chr17
|
53429764
|
53429778
|
SPIC
|
JASPAR
|
yes
|
|
54846970
|
|
|
chr17
|
53429764
|
53429778
|
STAT1
|
JASPAR
|
yes
|
|
54846971
|
|
|
chr17
|
53429764
|
53429779
|
AR
|
JASPAR
|
yes
|
|
54846972
|
|
|
chr17
|
53429764
|
53429779
|
STAT2
|
JASPAR
|
yes
|
|
54846973
|
|
|
chr17
|
53429766
|
53429787
|
IRF1
|
JASPAR
|
yes
|
|
54846974
|
|
|
chr17
|
53429769
|
53429783
|
IRF7
|
JASPAR
|
yes
|
|
54846975
|
|
|
chr17
|
53429770
|
53429785
|
PRDM1
|
JASPAR
|
yes
|
|
54846976
|
|
|
chr17
|
53429771
|
53429783
|
IRF1
|
JASPAR
|
yes
|
|
54846977
|
|
Genes associated with rs553397258[chr17:53429778], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |