EnhancerDB
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  3. rs553411877[chr1:42677193]
Enhancers that have rs553411877[chr1:42677193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42666765 42684795 enh11799
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Liver Bone (Osteoblast) Placenta Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553411877[chr1:42677193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42677191 42677206 HNF4A JASPAR yes 28448567
chr1 42677192 42677206 NR2F1 JASPAR yes 28448568
chr1 42677192 42677207 HNF4G JASPAR yes 28448569
Genes associated with rs553411877[chr1:42677193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More